Lao H. Saal: search on Z-Library

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1

A layered perceptron approach to categorizing cDNA microarray measurements

Ringner, Markus, Peterson, Carsten, Gruvberger, Sofia, Fernö, Mårten, Borg, Åke, Khan, Javed, Wei, Jun, Saal, Lao, Chen, Yidong, Ladanyi, Marc

Journal:

Nature Genetics

Year:

2001

Language:

english

File:

PDF, 29 KB

english, 2001

2

Expression profiling in cancer using cDNA microarrays

Javed Khan, Lao H. Saal, Michael L. Bittner, Yidong Chen, Jeffrey M. Trent, Paul S. Meltzer

Journal:

ELECTROPHORESIS

Year:

1999

Language:

english

File:

PDF, 188 KB

english, 1999

3

Microarray analysis of gliomas reveals chromosomal position-associated gene expression patterns and identifies potential immunotherapy targets

Oscar Persson, Morten Krogh, Lao H. Saal, Elisabet Englund, Jian Liu, Ramon Parsons, Nils Mandahl, Åke Borg, Bengt Widegren, Leif G. Salford

Journal:

Journal of Neuro-Oncology

Year:

2007

Language:

english

File:

PDF, 625 KB

english, 2007

4

cDNA microarrays detect activation of a myogenic transcription program by the PAX3-FKHR fusion oncogene

Khan, Javed, Bittner, Michael L., Saal, Lao H., Faller, Alicia J., Teichmann, Ulrike, Azorsa, David O., Gooden, Gerald C., Pavan, William J., Trent, Jeffrey M., Meltzer, Paul S.

Journal:

Nature Genetics

Year:

1999

Language:

english

File:

PDF, 91 KB

english, 1999

5

Development of a molecular taxonomy of small blue round-cell tumors using cDNA microarrays

Khan, Javed, Wei, Jun, Saal, Lao, Marc, Ladanyi, Markus, Ringnér, Peterson, Carsten, Chen, Yidong, Meltzer, Paul

Journal:

Nature Genetics

Year:

2001

Language:

english

File:

PDF, 29 KB

english, 2001

6

10.1038/89044

Khan, Javed, Wei, Jun S., Ringnér, Markus, Saal, Lao H., Ladanyi, Marc, Westermann, Frank, Berthold, Frank, Schwab, Manfred, Antonescu, Cristina R., Peterson, Carsten, Meltzer, Paul S.

Journal:

Nature Medicine

Year:

2001

Language:

english

File:

PDF, 3.76 MB

english, 2001

7

Recurrent gross mutations of the PTEN tumor suppressor gene in breast cancers with deficient DSB repair

Saal, Lao H, Gruvberger-Saal, Sofia K, Persson, Camilla, Lövgren, Kristina, Jumppanen, Mervi, Staaf, Johan, Jönsson, Göran, Pires, Maira M, Maurer, Matthew, Holm, Karolina

Journal:

Nature Genetics

Year:

2007

Language:

english

File:

PDF, 711 KB

english, 2007

8

CD44 isoforms are heterogeneously expressed in breast cancer and correlate with tumor subtypes and cancer stem cell markers

Eleonor Olsson, Gabriella Honeth, Pär-Ola Bendahl, Lao H Saal, Sofia Gruvberger-Saal, Markus Ringnér, Johan Vallon-Christersson, Göran Jönsson, Karolina Holm, Kristina Lövgren, Mårten Fernö, Dorthe Gr

Journal:

Year:

2011

Language:

english

File:

PDF, 336 KB

english, 2011

9

Global H3K27 trimethylation and EZH2 abundance in breast tumor subtypes

Holm, Karolina, Grabau, Dorthe, Lövgren, Kristina, Aradottir, Steina, Gruvberger-Saal, Sofia, Howlin, Jillian, Saal, Lao H., Ethier, Stephen P., Bendahl, Pär-Ola, Stål, Olle, Malmström, Per, Fernö, Må

Journal:

Molecular Oncology

Year:

2012

Language:

english

File:

PDF, 1.05 MB

english, 2012

10

Alterations of EGFR, p53 and PTEN that mimic changes found in basal-like breast cancer promote transformation of human mammary epithelial cells

Pires, Maira M., Hopkins, Benjamin D., Saal, Lao H., Parsons, Ramon E.

Journal:

Cancer Biology & Therapy

Year:

2013

Language:

english

File:

PDF, 2.00 MB

english, 2013

11

The CD44+/CD24-phenotype is enriched in basal-like breast tumors

Gabriella Honeth, Pär-Ola Bendahl, Markus Ringnér, Lao H Saal…

Journal:

Breast Cancer Research

Year:

2008

Language:

english

File:

PDF, 740 KB

english, 2008

12

BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data

Lao H Saal, Carl Troein, Johan Vallon-Christersson, Sofia Gruvberger…

Journal:

Year:

2002

Language:

english

File:

PDF, 1001 KB

english, 2002

13

cDNA Microarrays Detect Activation of a Myogenic Transcription Program by the PAX3-FKHR Fusion Oncogene

Javed Khan, Michael L. Bittner, Lao H. Saal, Ulrike Teichmann, David O. Azorsa, Gerald C. Gooden, William J. Pavan, Jeffrey M. Trent and Paul S. Meltzer

Journal:

Proceedings of the National Academy of Sciences

Year:

1999

Language:

english

File:

PDF, 1.40 MB

english, 1999

14

The Sweden Cancerome Analysis Network - Breast (SCAN-B) Initiative: a large-scale multicenter infrastructure towards implementation of breast cancer genomic analyses in the clinical routine

Saal, Lao H, Vallon-Christersson, Johan, Häkkinen, Jari, Hegardt, Cecilia, Grabau, Dorthe, Winter, Christof, Brueffer, Christian, Tang, Man-Hung, Reuterswärd, Christel, Schulz, Ralph, Karlsson, Anna,

Journal:

Genome Medicine

Year:

2015

Language:

english

File:

PDF, 977 KB

english, 2015

15

PTEN and NEDD4 in Human Breast Carcinoma

Chen, Yilun, van de Vijver, Marc J., Hibshoosh, Hanina, Parsons, Ramon, Saal, Lao H.

Journal:

Pathology & Oncology Research

Year:

2016

Language:

english

File:

PDF, 2.19 MB

english, 2016

16

Expression of functional toll like receptor 4 in estrogen receptor/progesterone receptor-negative breast cancer

Mehmeti, Meliha, Allaoui, Roni, Bergenfelz, Caroline, Saal, Lao H., Ethier, Stephen P., Johansson, Martin E., Jirström, Karin, Leandersson, Karin

Journal:

Breast Cancer Research

Year:

2015

Language:

english

File:

PDF, 2.41 MB

english, 2015

17

TopHat-Recondition: a post-processor for TopHat unmapped reads

Brueffer, Christian, Saal, Lao H.

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 390 KB

english, 2016

18

Apparent exchange rate for breast cancer characterization

Lasič, Samo, Oredsson, Stina, Partridge, Savannah C., Saal, Lao H., Topgaard, Daniel, Nilsson, Markus, Bryskhe, Karin

Journal:

NMR in Biomedicine

Year:

2016

Language:

english

File:

PDF, 393 KB

english, 2016

19

Efficacy versus effectiveness of clinical genetic testing criteria for BRCA1 and BRCA2 hereditary mutations in incident breast cancer

Nilsson, Martin P., Winter, Christof, Kristoffersson, Ulf, Rehn, Martin, Larsson, Christer, Saal, Lao H., Loman, Niklas

Journal:

Familial Cancer

Year:

2017

Language:

english

File:

PDF, 401 KB

english, 2017

20

NF1 -mutated melanoma tumors harbor distinct clinical and biological characteristics

Cirenajwis, Helena, Lauss, Martin, Ekedahl, Henrik, Törngren, Therese, Kvist, Anders, Saal, Lao H., Olsson, Håkan, Staaf, Johan, Carneiro, Ana, Ingvar, Christian, Harbst, Katja, Hayward, Nicholas K.,

Journal:

Molecular Oncology

Year:

2017

Language:

english

File:

PDF, 855 KB

english, 2017

21

p53 maintains baseline expression of multiple tumor suppressor genes

Pappas, Kyrie, Xu, Jia, Zairis, Sakellarios, Resnick-Silverman, Lois, Abate, Francesco, Steinbach, Nicole, Ozturk, Sait, Saal, Lao H, Su, Tao, Cheung, Pamela, Schmidt, Hank, Aaronson, Stuart A, Hibsho

Journal:

Molecular Cancer Research

Year:

2017

Language:

english

File:

PDF, 2.78 MB

english, 2017

22

Germline mutations in BRCA1 and BRCA2 incidentally revealed in a biobank research study: experiences from re-contacting mutation carriers and relatives

Nilsson, Martin P., Emmertz, Monica, Kristoffersson, Ulf, Borg, Åke, Larsson, Christer, Rehn, Martin, Winter, Christof, Saal, Lao H., Brandberg, Yvonne, Loman, Niklas

Journal:

Journal of Community Genetics

Year:

2017

Language:

english

File:

PDF, 413 KB

english, 2017

23

Elucidation of the Downstream Targets of the PAX3-FKHR Fusion Oncogene Found in Aveolar Rhabdomyosarcoma Using cDNA Microarrays

Khan, Javed, Bittner, Michael L, Chen, Yidong, Faller, Alicia J, Saal, Lao H, Azorsa, David A, Teichman, Uli, Pavan, William, Trent, Jeffrey M, Meltzer, Paul S

Journal:

Pediatric Research

Year:

1999

File:

PDF, 70 KB

1999

24

Mutation Screening of 1,237 Cancer Genes across Six Model Cell Lines of Basal-Like Breast Cancer

Olsson, Eleonor, Winter, Christof, George, Anthony, Chen, Yilun, Törngren, Therese, Bendahl, Pär-Ola, Borg, Åke, Gruvberger-Saal, Sofia K., Saal, Lao H., Galli, Alvaro

Journal:

Year:

2015

Language:

english

File:

PDF, 1.06 MB

english, 2015

25

Detection of circulating tumor cells and circulating tumor DNA before and after mammographic breast compression in a cohort of breast cancer patients scheduled for neoadjuvant treatment

Förnvik, Daniel, Aaltonen, Kristina E., Chen, Yilun, George, Anthony M., Brueffer, Christian, Rigo, Robert, Loman, Niklas, Saal, Lao H., Rydén, Lisa

Journal:

Breast Cancer Research and Treatment

Year:

2019

Language:

english

File:

PDF, 788 KB

english, 2019

26

Pre-operative plasma cell-free circulating tumor DNA and serum protein tumor markers as predictors of lung adenocarcinoma recurrence

Isaksson, Sofi, George, Anthony M., Jönsson, Mats, Cirenajwis, Helena, Jönsson, Per, Bendahl, Pär-Ola, Brunnström, Hans, Staaf, Johan, Saal, Lao H., Planck, Maria

Journal:

Acta Oncologica

Year:

2019

Language:

english

File:

PDF, 2.06 MB

english, 2019

27

Refinement of breast cancer molecular classification by miRNA expression profiles

Søkilde, Rolf, Persson, Helena, Ehinger, Anna, Pirona, Anna Chiara, Fernö, Mårten, Hegardt, Cecilia, Larsson, Christer, Loman, Niklas, Malmberg, Martin, Rydén, Lisa, Saal, Lao, Borg, Åke, Vallon-Chris

Journal:

Year:

2019

Language:

english

File:

PDF, 3.08 MB

english, 2019

28

Refinement of breast cancer molecular classification by miRNA expression profiles

Søkilde, Rolf, Persson, Helena, Ehinger, Anna, Pirona, Anna Chiara, Fernö, Mårten, Hegardt, Cecilia, Larsson, Christer, Loman, Niklas, Malmberg, Martin, Rydén, Lisa, Saal, Lao, Borg, Åke, Vallon-Chris

Journal:

Year:

2019

File:

PDF, 3.08 MB

2019

29

Prediction of lymph node metastasis in breast cancer by gene expression and clinicopathological models: Development and validation within a population based cohort

Dihge, Looket, Vallon-Christersson, Johan, Hegardt, Cecilia, Saal, Lao H, Häkkinen, Jari, Larsson, Christer, Ehinger, Anna, Loman, Niklas, Malmberg, Martin, Bendahl, Par-Ola, Borg, Ake, Staaf, Johan,

Journal:

Clinical Cancer Research

Year:

2019

Language:

english

File:

PDF, 11.80 MB

english, 2019

30

Agreement between molecular subtyping and surrogate subtype classification: a contemporary population-based study of ER-positive/HER2-negative primary breast cancer

Lundgren, Christine, Bendahl, Pär-Ola, Borg, Åke, Ehinger, Anna, Hegardt, Cecilia, Larsson, Christer, Loman, Niklas, Malmberg, Martin, Olofsson, Helena, Saal, Lao H., Sjöblom, Tobias, Lindman, Henrik,

Journal:

Breast Cancer Research and Treatment

Year:

2019

Language:

english

File:

PDF, 667 KB

english, 2019

31

Cross comparison and prognostic assessment of breast cancer multigene signatures in a large population-based contemporary clinical series

Vallon-Christersson, Johan, Häkkinen, Jari, Hegardt, Cecilia, Saal, Lao H., Larsson, Christer, Ehinger, Anna, Lindman, Henrik, Olofsson, Helena, Sjöblom, Tobias, Wärnberg, Fredrik, Ryden, Lisa, Loman,

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 3.71 MB

english, 2019

32

Tumor Characteristics and Molecular Subtypes in Breast Cancer Screening with Digital Breast Tomosynthesis: The Malmö Breast Tomosynthesis Screening Trial

Johnson, Kristin, Zackrisson, Sophia, Rosso, Aldana, Sartor, Hanna, Saal, Lao H., Andersson, Ingvar, Lång, Kristina

Journal:

Year:

2019

Language:

english

File:

PDF, 530 KB

english, 2019

33

Whole-genome sequencing of triple-negative breast cancers in a population-based clinical study

Staaf, Johan, Glodzik, Dominik, Bosch, Ana, Vallon-Christersson, Johan, Reuterswärd, Christel, Häkkinen, Jari, Degasperi, Andrea, Amarante, Tauanne Dias, Saal, Lao H., Hegardt, Cecilia, Stobart, Hilar

Journal:

Nature Medicine

Year:

2019

File:

PDF, 9.06 MB

2019

34

Subclonal patterns in follow-up of acute myeloid leukemia combining whole exome sequencing and ultrasensitive IBSAFE digital droplet analysis

Pettersson, Louise, Chen, Yilun, George, Anthony M., Rigo, Robert, Lazarevic, Vladimir, Juliusson, Gunnar, Saal, Lao H., Ehinger, Mats

Journal:

Leukemia and Lymphoma

Year:

2020

File:

PDF, 1.64 MB

2020

35

Prognostic implications of the expression levels of different immunoglobulin heavy chain-encoding RNAs in early breast cancer

Larsson, Christer, Ehinger, Anna, Winslow, Sofia, Leandersson, Karin, Klintman, Marie, Dahl, Ludvig, Vallon-Christersson, Johan, HÃ¤kkinen, Jari, Hegardt, Cecilia, Manjer, Jonas, Saal, Lao, RydÃ©n, Li

Journal:

npj Breast Cancer

Year:

2020

File:

PDF, 3.26 MB

2020

36

Features of increased malignancy in eosinophilic clear cell renal cell carcinoma

Nilsson, HelÃ©n, Lindgren, David, Axelson, HÃ¥kan, Brueffer, Christian, Saal, Lao H., Lundgren, Jaana, Johansson, Martin E.

Journal:

The Journal of Pathology

Year:

2020

File:

PDF, 5.88 MB

2020